MaRDMO: Difference between revisions

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<youtube width="900" height="540">yCRchlKATXs</youtube>
<youtube width="900" height="540">yCRchlKATXs</youtube>
Classes and Relations employed in the Workflow Documentation:
''Research Workflow'' [https://portal.mardi4nfdi.de/wiki/Property:P31 instance of] [https://portal.mardi4nfdi.de/wiki/Item:Q68657 research workflow]
[https://portal.mardi4nfdi.de/wiki/Property:P31 instance of] [https://portal.mardi4nfdi.de/wiki/Item:Q6534210 mathematically reproducible research workflow]
                      [https://portal.mardi4nfdi.de/wiki/Property:P31 instance of] [https://portal.mardi4nfdi.de/wiki/Item:Q6534211 runtime reproducible research workflow]
                      [https://portal.mardi4nfdi.de/wiki/Property:P31 instance of] [https://portal.mardi4nfdi.de/wiki/Item:Q6534212 result reproducible research workflow]
                      [https://portal.mardi4nfdi.de/wiki/Property:P31 instance of] [https://portal.mardi4nfdi.de/wiki/Item:Q6534213 original platform reproducible research workflow]
                      [https://portal.mardi4nfdi.de/wiki/Property:P31 instance of] [https://portal.mardi4nfdi.de/wiki/Item:Q6534214 cross-platform reproducible research workflow]
                      [https://portal.mardi4nfdi.de/wiki/Property:P31 instance of] [https://portal.mardi4nfdi.de/wiki/Item:Q6534215 transferable research workflow]
                                                                                  [https://portal.mardi4nfdi.de/wiki/Property:P8 comment] ''transferability options''


== How to document an Algorithm ==
== How to document an Algorithm ==

Revision as of 17:48, 27 March 2025

MaRDMO Logo by MaRDI, licensed under CC BY-NC-ND

MaRDMO is a plugin developed by TA4 designed to streamline the documentation of interdisciplinary workflows (Measure M4.1), mathematical models (Measure M4.2), and algorithms. Integrated within the Research Data Management Organiser (RDMO), it offers structured questionnaires guiding researchers through the documentation process. By fetching information from the MaRDI Portal, the MathModDB KG, the MathAlgoDB KG, and other established sources like Wikidata, MaRDMO ensures comprehensive documentation while minimizing the manual effort. Its seamless integration with RDMO enhances usability, allowing for the semi-automatic generation of documentations.

How to document a Workflow

The version of the MaRDMO Plugin used in this video is outdated. Still, it provides an idea how MaRDMO is functioning. Videos related to the current version of MaRDMO will be added soon.

Classes and Relations employed in the Workflow Documentation:

Research Workflow instance of research workflow

instance of mathematically reproducible research workflow

                     instance of runtime reproducible research workflow
                     instance of result reproducible research workflow
                     instance of original platform reproducible research workflow
                     instance of cross-platform reproducible research workflow
                     instance of transferable research workflow
                                                                                  comment transferability options

How to document an Algorithm

To document algorithms MaRDMO employs the MathAlgoDB ontology.

How to document a mathematical Model

To document mathematical models MaRDMO employs the MathModDB ontology.

Publications related to MaRDMO

Reidelbach, M., Ferrer. E and Weber M., 2023. MaRDMO Plugin - Document and Retrieve Workflows Using the MaRDI Portal. In Proceedings of the Conference on Research Data Infrastructure (Vol. 1). https://doi.org/10.52825/cordi.v1i.254

Reidelbach, M., Schembera, B., Weber, M. (2024). Towards a FAIR Documentation of Workflows and Models in Applied Mathematics. In: Buzzard, K., Dickenstein, A., Eick, B., Leykin, A., Ren, Y. (eds) Mathematical Software – ICMS 2024. ICMS 2024. Lecture Notes in Computer Science, vol 14749. Springer, Cham. https://doi.org/10.1007/978-3-031-64529-7_27

Talks related to MaRDMO

Reidelbach, M., 29.03.2023. MaRDMO - An RDMO plugin to populate and query the MaRDI Knowledge Graph. Talk @ 9th RDMO Community Meeting, Online.

Reidelbach, M., 17.04.2023. MaRDMO - An RDMO plugin to document and query MSO Workflows using the MaRDI Knowledge Graph. Talk @ Leibniz MMS Days, Potsdam. https://doi.org/10.5446/62069

Reidelbach, M., 26.05.2023. MaRDMO - An RDMO plugin to populate and query the MaRDI Knowledge Graph. Talk @ Meeting of 'Data Management Planning' working group of NFDI Section Common Infrastructures, Online.

Reidelbach, M., 29.06.2023. MaRDMO - Document and Retrieve Interdisciplinary Workflows Using the MaRDI Portal. Workshop @ NFDI-MATWREK Conference, Siegburg.

Reidelbach, M., 25.09.2023. MaRDMO Plugin - Document and Retrieve Interdisciplinary Workflows Using the MaRDI Portal. Talk @ MaRDI Mini-Symposium in DMV, Illmenau.

Weber, M., 26.09.2023. MaRDMO – An RDMO plugin to populate and query the MaRDI Knowledge Graph. Talk @ KLAIM, Kaiserslautern.

Reidelbach, M., 27.09.2023. MaRDMO Plugin - Document and Retrieve Interdisciplinary Workflows Using the MaRDI Portal. Talk @ NFDI4Ing Conference, Online. https://doi.org/10.5281/zenodo.8388577

Reidelbach, M., 10.10.2023. MaRDMO – Document and Query Interdisciplinary Workflows Using the MaRDI Portal. Talk @ "Maths meets Information Specialists" Workshop, Leipzig.

Reidelbach, M., 12.03.2024. Mathematical Research Data Initiative - Vision and Services. Talk @ Math+ Conference "Interpretations, Explanations, and Knowledge Gain", Berlin.

Reidelbach, M., 24.07.2024. Towards a FAIR Documentation of Workflows and Models in Applied Mathematics. Talk @ ICMS 2024, Durham, England.

Reidelbach, M., 18.10.2024. Towards a FAIR Documentation of Workflows and Models in Applied Mathematics. Talk @ Physical Sciences in the NFDI, Online.

Reidelbach, M., 11.02.2025. No Data without... Reuse. Talk @ No Data Without... Excellence: A Coffee Lecture Series organized by the Excellence Clusters NeuroCure, UniSysCat, Matters Of Activity and Math+, Online.

Useful Links

Research Data Management Organiser: General Information & Documentation

MaRDMO: Export Plugin & Questionnaire