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Clover v3 assembly - MaRDI portal

Clover v3 assembly

From MaRDI portal
Dataset:6685893



DOI10.5281/zenodo.1095215Zenodo1095215MaRDI QIDQ6685893

Dataset published at Zenodo repository.

Parwinder Kaur, Olga Dudchenko, Philipp E. Bayer, Erez Lieberman Aiden, Christopher Lui, William Erskine, Melanie Pham

Publication date: 7 December 2017

Copyright license: Creative Commons Attribution 4.0 International



We present an assembly of the genome of subterranean clover, Trifolium subterraneum, an important pasture legume. Specifically, in situ Hi-C data (48X) was used to correct misjoins and anchor, order, and orient scaffolds in a previously published genome assembly (TSUd_r1.1; scaffold N50: 287kb). This resulted in an improved genome assembly (TrSub3; scaffold N50: 56Mb) containing eight chromosome-length scaffolds that span 95% of the sequenced bases in the input assembly.






This page was built for dataset: Clover v3 assembly