Datasets, reproducible codes, and results for evaluating differential expression analysis methods on population-level RNA-seq data

DOI10.5281/zenodo.6554347Zenodo6554347MaRDI QIDQ6688365

Dataset published at Zenodo repository.

Kalidou Ba, Rodolphe Thiébaut, Boris P. Hejblum, Denis Agniel

Publication date: 3 May 2022

Copyright license: Creative Commons Attribution 4.0 International

Description

This upload contains the necessary R codes and data to reproduce the FDR and Power results described in our correspondence Neglecting normalization impact in semi-synthetic RNA-seq data simulation generates artificial false positives to Li Y, Ge X, Peng F, Li W, Li JJ, Exaggerated false positives by popular differential expression methods when analyzing human population samples, Genome Biology 23, 79, 2022, DOI: 10.1186/s13059-022-02648-4.

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