Deprecated: $wgMWOAuthSharedUserIDs=false is deprecated, set $wgMWOAuthSharedUserIDs=true, $wgMWOAuthSharedUserSource='local' instead [Called from MediaWiki\HookContainer\HookContainer::run in /var/www/html/w/includes/HookContainer/HookContainer.php at line 135] in /var/www/html/w/includes/Debug/MWDebug.php on line 372

Notice: Unexpected clearActionName after getActionName already called in /var/www/html/w/includes/Context/RequestContext.php on line 321
LipidMS v3.0.3: source code and example of lipidomics dataset for human serum - MaRDI portal

Deprecated: Use of MediaWiki\Skin\SkinTemplate::injectLegacyMenusIntoPersonalTools was deprecated in Please make sure Skin option menus contains `user-menu` (and possibly `notifications`, `user-interface-preferences`, `user-page`) 1.46. [Called from MediaWiki\Skin\SkinTemplate::getPortletsTemplateData in /var/www/html/w/includes/Skin/SkinTemplate.php at line 691] in /var/www/html/w/includes/Debug/MWDebug.php on line 372

Deprecated: Use of QuickTemplate::(get/html/text/haveData) with parameter `personal_urls` was deprecated in MediaWiki Use content_navigation instead. [Called from MediaWiki\Skin\QuickTemplate::get in /var/www/html/w/includes/Skin/QuickTemplate.php at line 131] in /var/www/html/w/includes/Debug/MWDebug.php on line 372

LipidMS v3.0.3: source code and example of lipidomics dataset for human serum

From MaRDI portal
(Redirected from Dataset:6690791)



DOI10.5281/zenodo.6645498Zenodo6645498MaRDI QIDQ6690791

Dataset published at Zenodo repository.

Author name not available (Why is that?)

Publication date: 23 February 2022

Copyright license: No records found.



Description

Source code and example dataset for LipidMS v3.0.3: a commercially available pooled human serum sample was analyzed in positive and negative detection modes and using MS1, DIA and DDA approaches. The obtained datasetswere processed using LipidMS v3.0, MS-DIAL v4.80or a combination of data pre-processing in XCMS v3.16and lipid annotation in LipidMS v3.0. This repository contains: - Raw data for positive and negative polarities using MS scan, DIA and DDA acquisition modes. - R scripts for processing with LipidMS v3.0.3 and XCMS v3.16.1 and parameters used for processing with MS-DIAL v4.80. - Source code for LipidMS v3.0.3. - Results obtained for the 3 different softwares employed. - Tutorials for LipidMS R package and online application. - Human pooled serum analysis Raw data for positive and negative polarities using MS scan, DIA and DDA acquisition modes for a human pooled serum sample with or without the addition of 68 lipid standars Results for the data processing and annotation of the lipid standards using LipidMS 3.0, XCMS 3.16 and MS-DIAL 4.80 Results for the manual curation of the total lipid annotations provided by both LipidMS 3.0 and MS-DIAL 4.80






This page was built for dataset: LipidMS v3.0.3: source code and example of lipidomics dataset for human serum

Retrieved from "https://mardi.schubotz.org/w/index.php?title=LipidMS_v3.0.3:_source_code_and_example_of_lipidomics_dataset_for_human_serum&oldid=44860132"
Powered by MediaWiki