Deprecated: $wgMWOAuthSharedUserIDs=false is deprecated, set $wgMWOAuthSharedUserIDs=true, $wgMWOAuthSharedUserSource='local' instead [Called from MediaWiki\HookContainer\HookContainer::run in /var/www/html/w/includes/HookContainer/HookContainer.php at line 135] in /var/www/html/w/includes/Debug/MWDebug.php on line 372

Notice: Unexpected clearActionName after getActionName already called in /var/www/html/w/includes/Context/RequestContext.php on line 321
Library size confounds biology in spatial transcriptomics data - MaRDI portal

Deprecated: Use of MediaWiki\Skin\SkinTemplate::injectLegacyMenusIntoPersonalTools was deprecated in Please make sure Skin option menus contains `user-menu` (and possibly `notifications`, `user-interface-preferences`, `user-page`) 1.46. [Called from MediaWiki\Skin\SkinTemplate::getPortletsTemplateData in /var/www/html/w/includes/Skin/SkinTemplate.php at line 691] in /var/www/html/w/includes/Debug/MWDebug.php on line 372

Deprecated: Use of QuickTemplate::(get/html/text/haveData) with parameter `personal_urls` was deprecated in MediaWiki Use content_navigation instead. [Called from MediaWiki\Skin\QuickTemplate::get in /var/www/html/w/includes/Skin/QuickTemplate.php at line 131] in /var/www/html/w/includes/Debug/MWDebug.php on line 372

Library size confounds biology in spatial transcriptomics data

From MaRDI portal
(Redirected from Dataset:6690822)



DOI10.5281/zenodo.10516814Zenodo10516814MaRDI QIDQ6690822

Dataset published at Zenodo repository.

Author name not available (Why is that?)

Publication date: 31 January 2024

Copyright license: No records found.



Description

This dataset contains annotated sub-cellular localised spatial measurements from the Visium, Xenium and CosMx platforms. Specifically, it includes datasets analysed in the publication Bhuva et. al, 2023 titled Library size confounds biology in spatial transcriptomics data. Raw transcript detections are presented. Data is best accessed through the accompanying SubcellularSpatialData R/Bioconductor package. Region files used to annotate individual transcript detections are presented in the form of GeoJSON files.






This page was built for dataset: Library size confounds biology in spatial transcriptomics data

Retrieved from "https://mardi.schubotz.org/w/index.php?title=Library_size_confounds_biology_in_spatial_transcriptomics_data&oldid=44860159"
Powered by MediaWiki