Microbiome dataset used in SIMON analysis for early-stage detection of cancer

DOI10.5281/zenodo.4121516Zenodo4121516MaRDI QIDQ6694543

Dataset published at Zenodo repository.

Adriana Tomic

Publication date: 23 October 2020

Copyright license: Creative Commons Attribution 4.0 International

Description

The Zeller dataset contains information on the microbiome species abundance in healthy individuals and colorectal cancer patients (doi: 10.15252/msb.20145645) and was used for the SIMON analysis as described (https://doi.org/10.1101/2020.08.16.252767). The data was access through MetagenomicData package as described byPasolli and colleagues (doi: 10.1038/nmeth.4468). In total 184 individuals were included of which 93 were healthy controls and 91 colorectal cancer patients.

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