POINT (Q106288)

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Protein Structure Guided Local Test
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POINT
Protein Structure Guided Local Test

    Statements

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    1.2
    6 June 2022
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    1.1
    5 March 2019
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    1.2
    7 June 2022
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    1.3
    1 October 2023
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    1 October 2023
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    Provides an implementation of a rare variant association test that utilizes protein tertiary structure to increase signal and to identify likely causal variants. Performs structure-guided collapsing, which leads to local tests that borrow information from neighboring variants on a protein and that provide association information on a variant-specific level. For details of the implemented method see West, R. M., Lu, W., Rotroff, D. M., Kuenemann, M., Chang, S-M., Wagner M. J., Buse, J. B., Motsinger-Reif, A., Fourches, D., and Tzeng, J-Y. (2019) <doi:10.1371/journal.pcbi.1006722>.
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    Identifiers

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