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cinaR - MaRDI portal

cinaR (Q108270)

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A Computational Pipeline for Bulk 'ATAC-Seq' Profiles
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English
cinaR
A Computational Pipeline for Bulk 'ATAC-Seq' Profiles

    Statements

    instance of
    R package
    0 references
    last update
    18 May 2022
    0 references
    software version identifier
    0.2.3
    publication date
    18 May 2022
    0 references
    author
    Onur Karakaslar
    0 references
    Duygu Ucar
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    imports
    ChIPseeker
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    DESeq2
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    edgeR
    0 references
    fgsea
    0 references
    GenomicRanges
    0 references
    ggplot2
    0 references
    limma
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    utils
    0 references
    preprocessCore
    0 references
    writexl
    0 references
    dplyr
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    ggrepel
    0 references
    grDevices
    0 references
    pheatmap
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    RColorBrewer
    0 references
    sva
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    programmed in
    R
    0 references
    depends on software
    R
    0 references

    Identifiers

    CRAN project
    cinaR
    0 references
     
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