Codon preference and primary sequence structure in protein-coding regions (Q1111970)
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scientific article; zbMATH DE number 4077019
| Language | Label | Description | Also known as |
|---|---|---|---|
| English | Codon preference and primary sequence structure in protein-coding regions |
scientific article; zbMATH DE number 4077019 |
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Codon preference and primary sequence structure in protein-coding regions (English)
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1989
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The stochastic complexity of a data base of 365 protein-coding regions is analysed. When the primary sequence is modeled as a spatially homogeneous Markov source, the fit to observed codon preference is very poor. The situation improves substantially when a non-homogeneous model is used. Some implications for the estimation of species phylogeny and substitution rates are discussed.
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molecular biology
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stochastic complexity
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data base of 365 protein-coding regions
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spatially homogeneous Markov source
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codon preference
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non- homogeneous model
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estimation of species phylogeny
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substitution rates
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