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phyloseqGraphTest - MaRDI portal

phyloseqGraphTest (Q140708)

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Graph-Based Permutation Tests for Microbiome Data
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phyloseqGraphTest
Graph-Based Permutation Tests for Microbiome Data

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    0.1.0
    7 February 2020
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    0.0.1
    15 March 2018
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    0.0.2
    27 June 2018
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    0.1.1
    5 February 2024
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    5 February 2024
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    Provides functions for graph-based multiple-sample testing and visualization of microbiome data, in particular data stored in 'phyloseq' objects. The tests are based on those described in Friedman and Rafsky (1979) <http://www.jstor.org/stable/2958919>, and the tests are described in more detail in Callahan et al. (2016) <doi:10.12688/f1000research.8986.1>.
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