Deprecated: $wgMWOAuthSharedUserIDs=false is deprecated, set $wgMWOAuthSharedUserIDs=true, $wgMWOAuthSharedUserSource='local' instead [Called from MediaWiki\HookContainer\HookContainer::run in /var/www/html/w/includes/HookContainer/HookContainer.php at line 135] in /var/www/html/w/includes/Debug/MWDebug.php on line 372
Fluorescence image time series for pair correlation function analysis - MaRDI portal

Deprecated: Use of MediaWiki\Skin\SkinTemplate::injectLegacyMenusIntoPersonalTools was deprecated in Please make sure Skin option menus contains `user-menu` (and possibly `notifications`, `user-interface-preferences`, `user-page`) 1.46. [Called from MediaWiki\Skin\SkinTemplate::getPortletsTemplateData in /var/www/html/w/includes/Skin/SkinTemplate.php at line 691] in /var/www/html/w/includes/Debug/MWDebug.php on line 372

Deprecated: Use of QuickTemplate::(get/html/text/haveData) with parameter `personal_urls` was deprecated in MediaWiki Use content_navigation instead. [Called from MediaWiki\Skin\QuickTemplate::get in /var/www/html/w/includes/Skin/QuickTemplate.php at line 131] in /var/www/html/w/includes/Debug/MWDebug.php on line 372

Fluorescence image time series for pair correlation function analysis (Q6683743)

From MaRDI portal





Dataset published at Zenodo repository.
Language Label Description Also known as
English
Fluorescence image time series for pair correlation function analysis
Dataset published at Zenodo repository.

    Statements

    0 references
    Data files for the tutorial "Pair Correlation Function Analysis of Fluorescence Fluctuations in Big Image Time Series using Python", presented at the Big Data Image Processing Analysis BigDIPA workshops 2016, 2017, and 2018.The Simulation_Channel.bin file contains the result of a simulation of fluorescent particles diffusing on a 64x64 grid. The grid contains a diagonal, 300 nm wide channel, which restricts free diffusion. The file was produced using the Globals for Images, SimFCS software. The array shape is (32000, 64, 64), the data type is uint16.The Simulation_Channel.ipcf.bin file contains the expected results of an ipCF analysis with 32 points at radius 6, and 32 bins. The array shape is (52, 52, 32, 30), the data type is float32.The nih3t3-egfp_2.zip dataset contains a time series of SPIM images of a biological cell. It consists 35,000 TIFF files of 1024x512 16-bit grayscale samples each, 34.5 GB total.
    0 references
    3 November 2016
    0 references
    0 references
    0 references

    Identifiers

    0 references