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Genome-Wide Mutational Signatures of Aristolochic Acid and Its Application as a Screening Tool - MaRDI portal

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Genome-Wide Mutational Signatures of Aristolochic Acid and Its Application as a Screening Tool (Q6686459)

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Dataset published at Zenodo repository.
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Genome-Wide Mutational Signatures of Aristolochic Acid and Its Application as a Screening Tool
Dataset published at Zenodo repository.

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    The .zip files contain the fastq files for the cell line data published in DOI: 10.1126/scitranslmed.3006086 plus results of analyzing these data. HK2_AA and HK2b-8d2 were exposed to AA (aristolochic acid I), and HK2_ctrl was an unexposed control. The .tsv files are VCF-like files with the mutations found in the exposed cells. spectrum_counts.txt are what are now called SBS96 spectra -- counts of single base substitutions in the contexts of preceding and following bases. The PDF file has plots of these. (The HUC1 cells that were exposed did not show AA-related mutations.)
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    7 August 2013
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