Supplementary data for 'scROSHI - robust supervised hierarchical identification of single cells' (Q6686527)
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Dataset published at Zenodo repository.
| Language | Label | Description | Also known as |
|---|---|---|---|
| English | Supplementary data for 'scROSHI - robust supervised hierarchical identification of single cells' |
Dataset published at Zenodo repository. |
Statements
This record contains some of the supplementary files for the manuscript scROSHI - robust supervised hierarchical identification of single cells by Prummer et al. The file scROSHI_Fig03_counts.zip contains SingleCellExperiment R objects as RDS files, sce_A.RDS, sce_B.RDS, sce_C.RDS, corresponding to the three samples shown in Figure 3.The assay slot of the SingleCellExperiment objects contains the gene x cell raw count matrix, the colData slot contains the description for each cell: barcode, celltype_major, celltype_final, cnv_status. Please see https://github.com/ETH-NEXUS/scROSHI for code generating the cell type labels.
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24 May 2022
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