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The Natural Products Atlas - data download - MaRDI portal

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The Natural Products Atlas - data download (Q6692775)

From MaRDI portal





Dataset published at Zenodo repository.
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English
The Natural Products Atlas - data download
Dataset published at Zenodo repository.

    Statements

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    Download files from the Natural Products Atlas (npatlas.org). van Santen, J. A.; Poynton, E. F.; Iskakova, D.; McMann, E.; Alsup, T. A.; Clark, T. N.; Fergusson, C. H.; Fewer, D. P.; Hughes, A. H.; McCadden, C. A.; Parra Villalobos, J.; Soldatou, S.; Rudolf, J. D.; Janssen, E. M.-L.; Duncan, K. R.; Linington, R. G.* "The Natural Products Atlas 2.0: A Database of Microbially-Derived Natural Products",Nucleic Acids Research,2022, 50, D1, 11, D1317-D1323.10.1093/nar/gkab941 van Santen, J. A.; Jacob, G.; Leen Singh, A.; Aniebok, V.; Balunas, M. J.; Bunsko, D.; Carnevale Neto, F.; Castao-Espriu, L.; Chang, C.; Clark, T. N.; Cleary Little, J. L.; Delgadillo, D. A.; Dorrestein, P. C.; Duncan, K. R.; Egan, J. M.; Galey, M. M.; Haeckl, F. P. J.; Hua, A.; Hughes, A. H.; Iskakova, D.; Khadilkar, A.; Lee, J.-H.; Lee, S.; LeGrow, N.; Liu, D. Y.; Macho, J. M.; McCaughey, C. S.; Medema, M. H.; Neupane, R. P.; ODonnell, T. J.; Paula, J. S.; Sanchez, L. M.; Shaikh, A. F.; Soldatou, S.; Terlouw, B. R.; Tran, T. A.; Valentine, M.; van der Hooft, J. J. J.; Vo, D. A.; Wang, M.; Wilson, D.; Zink, K. E.; Linington, R. G.* "The Natural Products Atlas: An Open Access Knowledge Base for Microbial Natural Products Discovery,ACS Central Science,2019, 5, 11, 1824-1833.10.1021/acscentsci.9b00806 Now includes ontological data from: NP Classifier -https://npclassifier.ucsd.edu/ ClassyFire -http://classyfire.wishartlab.com/ Including archived versions, extra data download types, and new MIBiG and GNPS IDs Includes dump of compounds deemed out of scope and removed from DBon May 19, 2021. The latest versions (v2021_08 onward) include the ontological data in the full JSON download. Starting in v2024_09 - compounds with exclusions are included as a separate file but kept in the database for reference.
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    13 September 2024
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    v2024_09
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    Identifiers

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