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Example Dataset for npstat: Population genetics from Pooled NGS data NPStat v1: User guide - MaRDI portal

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Example Dataset for npstat: Population genetics from Pooled NGS data NPStat v1: User guide (Q6705799)

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Dataset published at Zenodo repository.
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Example Dataset for npstat: Population genetics from Pooled NGS data NPStat v1: User guide
Dataset published at Zenodo repository.

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    Example Dataset for npstat to test the program and the different options. The example dataset contains a pileup file with sequences of of the 2L chromosome from fifteen pooled inbreed individuals of Drosophila melanogaster (doi: 10.1038/nature10811). The dataset also contains the sequence reference of the 2L chromosome in fasta format, an outgroup sequence in fasta format of D. yakuba (SRR26246471), a GFF3 annotation file and a file with a brief list of selected SNPs to be analyzed.
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    23 August 2024
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    1.0
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