Protein Graphs Dataset from PDB (Q6708166)
From MaRDI portal
| This is the item page for this Wikibase entity, intended for internal use and editing purposes. Please use this page instead for the normal view: Protein Graphs Dataset from PDB |
Dataset published at Zenodo repository.
| Language | Label | Description | Also known as |
|---|---|---|---|
| English | Protein Graphs Dataset from PDB |
Dataset published at Zenodo repository. |
Statements
This dataset contains the protein graphs constructed fromPDB, theProtein Data Bank (www.rcsb.org/pdb), used in thepaper: Nilothpal Talukder andMohammed J. Zaki.A distributed approach for graph mining in massive networks.Data Mining and Knowledge Discovery: Special Issue on ECML/PKDD 2016 Journal Track Papers, 30(5):10241052, 2016. URL:http://link.springer.com/article/10.1007/s10618-016-0466-x. The format of graphs is as follows: t # GID v VIDVLABEL e VID1 VID2 ELABEL where GID is a graph identifier (integer) VID is a vertex identifier (integer) withVLABEL itsvertex label (integer) VID1 VID2 denotes an edge between the two vertices, with ELABEL the edge label (integer)
0 references
28 March 2020
0 references