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Preprocessed rat brain voxel time series - MaRDI portal

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Preprocessed rat brain voxel time series (Q6716154)

From MaRDI portal





Dataset published at Zenodo repository.
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English
Preprocessed rat brain voxel time series
Dataset published at Zenodo repository.

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    Preprocessed version of voxel time-series for three rats, originally described in Becq et al., Functional connectivity is preserved but reorganized across several anesthetic regimes, NeuroImage, 2020. Used in Achard et al., Inter-regional correlation estimators for functional magnetic resonance imaging, arXiv, 2022, arXiv:2011.08269. The files named coord_ROI_x.txt contain the coordinates of the voxels inside region x (each line corresponds to one voxel). The files named ts_ROI_x.txt contain the BOLD signal time series of the voxels inside region x (each line corresponds to one voxel, each column to one timepoint). The voxels with time series equal to zero have been removed The files named weight_ROI_x.txt contain the weights associated with the voxels inside region x (each line corresponds to one voxel). Indeed, when assigning voxels to regions, some voxels end up at the border of several regions. These weights characterize the proportion of a given voxel present inside a given region. Hence, some voxels are included in several different regions. So when we compute the voxel-to-voxel inter-correlation between two regions we sometimes end up with inter-correlations equal to 1. In the current dataset this issue has been resolved and each voxel has been assigned to a single region.
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    15 November 2022
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    1.0.0
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