metaGE (Q71433)
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Meta-Analysis for Detecting Genotype x Environment Associations
| Language | Label | Description | Also known as |
|---|---|---|---|
| English | metaGE |
Meta-Analysis for Detecting Genotype x Environment Associations |
Statements
28 September 2023
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Meta-analysis of genome-wide association studies for studying Genotype x Environment interactions. The 4 main functions of the package metaGE.collect(), metaGE.cor(), metaGE.fit() and metaGE.test() correspond to 4 steps to perform the meta-analysis: Collecting the results of genome-wide association studies data from different files; Inferring the inter-environment correlation matrix; Performing global test procedure for quantitative trait loci detection (using a Fixed or Random effect model); Performing tests of contrast or meta-regression using an environmental co-factor. (De Walsche, A., et al. (2023) <doi:10.1101/2023.03.01.530237>).
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