Deprecated: $wgMWOAuthSharedUserIDs=false is deprecated, set $wgMWOAuthSharedUserIDs=true, $wgMWOAuthSharedUserSource='local' instead [Called from MediaWiki\HookContainer\HookContainer::run in /var/www/html/w/includes/HookContainer/HookContainer.php at line 135] in /var/www/html/w/includes/Debug/MWDebug.php on line 372
AnanseSeurat - MaRDI portal

AnanseSeurat (Q79450)

From MaRDI portal
Construct ANANSE GRN-Analysis Seurat
Language Label Description Also known as
English
AnanseSeurat
Construct ANANSE GRN-Analysis Seurat

    Statements

    0 references
    1.1.0
    25 January 2023
    0 references
    1.2.0
    11 November 2023
    0 references
    0 references
    0 references
    11 November 2023
    0 references
    Enables gene regulatory network (GRN) analysis on single cell clusters, using the GRN analysis software 'ANANSE', Xu et al.(2021) <doi:10.1093/nar/gkab598>. Export data from 'Seurat' objects, for GRN analysis by 'ANANSE' implemented in 'snakemake'. Finally, incorporate results for visualization and interpretation.
    0 references
    0 references
    0 references
    0 references
    0 references
    0 references
    0 references
    0 references
    0 references
    0 references
    0 references
    0 references
    0 references
    0 references
    0 references

    Identifiers

    0 references