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Oopsacas minuta alternative masked genomes and predicted proteomes - MaRDI portal

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Oopsacas minuta alternative masked genomes and predicted proteomes

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DOI10.5281/zenodo.7505502Zenodo7505502MaRDI QIDQ6699560

Dataset published at Zenodo repository.

Author name not available (Why is that?)

Publication date: 5 January 2023

Copyright license: No records found.



Description

Oopsacas minuta alternative versions. The genome was masked using the Dfam TE tool container (https://github.com/Dfam-consortium/TETools). oopsacas_minuta_hardmasked.fna : genome hardmasked (with N). Low complexity regions are also masked. oopsacas_minuta_hardmasked_nolow.fna: genome hardmasked (with N). Low complexity regions are not masked. oopsacas_minuta_softmasked.fna: genome softmasked (lower-case letters). Low complexity regions are also masked. oopsacas_minuta_softmasked_nolow.fna: genome softmasked (lower-case letters). Low complexity regions are not masked. Proteins were predicted using Braker v1.9. oopsacas_minuta_hardmasked.faa : from oopsacas_minuta_hardmasked.fna oopsacas_minuta_hardmasked_nolow.faa: fromoopsacas_minuta_hardmasked_nolow.fna oopsacas_minuta_softmasked.faa: from oopsacas_minuta_softmasked.fna oopsacas_minuta_softmasked_nolow.faa: from oopsacas_minuta_softmasked_nolow.fna






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