Method for inferring and extracting reliable genetic interactions from time-series profile of gene expression

DOI10.1016/j.mbs.2008.06.007zbMath1156.92020OpenAlexW1991805053WikidataQ46905140 ScholiaQ46905140MaRDI QIDQ1005712

Takanori Ueda, Masahiro Okamoto, Yukihiro Maki, Masahiko Nakatsui, Isao Ono

Publication date: 9 March 2009

Published in: Mathematical Biosciences (Search for Journal in Brave)

Full work available at URL: https://doi.org/10.1016/j.mbs.2008.06.007

zbMATH Keywords

system identificationinverse problemgene expression networkS-system formalism

Mathematics Subject Classification ID

Approximation methods and heuristics in mathematical programming (90C59) Biochemistry, molecular biology (92C40) Genetics and epigenetics (92D10)

Related Items (2)

Biochemical systems theory: a review ⋮ Inference of \(S\)-system models of genetic networks by solving one-dimensional function optimization problems

Uses Software

• WinBEST-KIT

Cites Work

• Unnamed Item
• Estimating parameters for generalized mass action models using constraint propagation
• Efficient Solution of Nonlinear Ordinary Differential Equations Expressed in S-system Canonical Form

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