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A Poisson model of sequence comparison and its application to coronavirus phylogeny

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Publication:1010250
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DOI10.1016/j.mbs.2008.11.006zbMath1157.92310OpenAlexW2054497540WikidataQ51860394 ScholiaQ51860394MaRDI QIDQ1010250

Xiaoqi Zheng, Yufang Qin, Jun Wang

Publication date: 3 April 2009

Published in: Mathematical Biosciences (Search for Journal in Brave)

Full work available at URL: http://europepmc.org/articles/pmc7094598


zbMATH Keywords

similarityPoisson modelcoronavirus phylogenyword composition


Mathematics Subject Classification ID

Problems related to evolution (92D15) Combinatorics on words (68R15) Biochemistry, molecular biology (92C40) Discrete mathematics in relation to computer science (68R99)


Related Items

A linguistic approach to classification of bacterial genomes ⋮ Phylogenetic analysis of DNA sequences with a novel characteristic vector


Uses Software

  • CVTree3


Cites Work

  • WSE, a new sequence distance measure based on word frequencies
  • Statistical Measures of DNA Sequence Dissimilarity under Markov Chain Models of Base Composition
  • A measure of the similarity of sets of sequences not requiring sequence alignment.
  • A Measure of DNA Sequence Dissimilarity Based on Mahalanobis Distance between Frequencies of Words
  • Research in Computational Molecular Biology
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