A grammatical approach to RNA-RNA interaction prediction

DOI10.1016/J.PATCOG.2008.08.004zbMath1178.68302OpenAlexW2051944221MaRDI QIDQ1013373

Hiroyuki Seki, Tatsuya Akutsu, Yuki Kato

Publication date: 17 April 2009

Published in: Pattern Recognition (Search for Journal in Brave)

Full work available at URL: https://doi.org/10.1016/j.patcog.2008.08.004

zbMATH Keywords

RNA-RNA interactionjoint secondary structurekissing hairpinmultiple context-free grammar

Mathematics Subject Classification ID

Pattern recognition, speech recognition (68T10) Grammars and rewriting systems (68Q42)

Related Items (2)

Using temperature effects to predict the interactions between two RNAs ⋮ A heuristic approach to RNA-RNA interaction prediction

Uses Software

• Mfold

Cites Work

• Classifying RNA pseudoknotted structures
• On multiple context-free grammars
• Tree adjoining grammars for RNA structure prediction
• Algorithms for Loop Matchings
• Biological Sequence Analysis
• Research in Computational Molecular Biology

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