Path finding approaches and metabolic pathways

DOI10.1016/J.DAM.2008.06.035zbMath1182.92038OpenAlexW1977340584MaRDI QIDQ1026179

F. J. Planes, John E. Beasley

Publication date: 24 June 2009

Published in: Discrete Applied Mathematics (Search for Journal in Brave)

Full work available at URL: https://doi.org/10.1016/j.dam.2008.06.035

zbMATH Keywords

shortest pathsystems biologypath findingmetabolic pathways

Mathematics Subject Classification ID

Applications of graph theory (05C90) Integer programming (90C10) Kinetics in biochemical problems (pharmacokinetics, enzyme kinetics, etc.) (92C45) Paths and cycles (05C38) Systems biology, networks (92C42)

Uses Software

• CPLEX
• PathMiner

Cites Work

• CP(Graph): Introducing a Graph Computation Domain in Constraint Programming
• A Class of Label-Correcting Methods for the K Shortest Paths Problem

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