Optimized homology searches of the gene and protein sequence data banks

DOI10.1007/BF02462324zbMath0606.92016OpenAlexW4244842753WikidataQ36466279 ScholiaQ36466279MaRDI QIDQ1085103

Charles B. Lawrence, Daniel A. Goldman, Robert T. Hood

Publication date: 1986

Published in: Bulletin of Mathematical Biology (Search for Journal in Brave)

Full work available at URL: https://doi.org/10.1007/bf02462324

zbMATH Keywords

similarity measuresbiochemistrycomparison of nucleotide or amino acid sequencesgene and protein sequence data banksoptimized homology searches

Mathematics Subject Classification ID

Searching and sorting (68P10) Physiological, cellular and medical topics (92Cxx)

Related Items

Significance levels for biological sequence comparison using non-linear similarity functions ⋮ On computing all suboptimal alignments

Cites Work

• General methods of sequence comparison
• A nonlinear measure of subalignment similarity and its significance levels
• Locally optimal subalignments using nonlinear similarity functions
• An Overview of Sequence Comparison: Time Warps, String Edits, and Macromolecules