Some biological sequence metrics
From MaRDI portal
Publication:1232251
DOI10.1016/0001-8708(76)90202-4zbMath0342.92003OpenAlexW2135326109WikidataQ56514160 ScholiaQ56514160MaRDI QIDQ1232251
Michael S. Waterman, William A. Beyer, Temple F. Smith
Publication date: 1976
Published in: Advances in Mathematics (Search for Journal in Brave)
Full work available at URL: https://doi.org/10.1016/0001-8708(76)90202-4
Related Items
Multiobjective artificial fish swarm algorithm for multiple sequence alignment, Optimal sequence alignment using affine gap costs, A nonlinear measure of subalignment similarity and its significance levels, Locally optimal subalignments using nonlinear similarity functions, Sequence comparison with concave weighting functions, Approximate matching of regular expressions, Tropical geometric variation of tree shapes, A measure of DNA sequence similarity by Fourier transform with applications on hierarchical clustering, The undecidability of the unrestricted modified edit distance, Approximation algorithms for multiple sequence alignment, Cauchy sequences in quasi-pseudo-metric spaces, Optimal sequence alignment allowing for long gaps, Consistency of optimal sequence alignments, Comparison of biosequences, Computing similarity of run-length encoded strings with affine gap penalty, A local algorithm for DNA sequence alignment with inversions, A survey of multiple sequence comparison methods, Amino acid sequences and DP matching: A new method for alignment, Partially local multi-way alignments, A multiple sequence comparison method, On non-Hausdorff spaces, The mean value of the squared path-difference distance for rooted phylogenetic trees, RNA secondary structure: a complete mathematical analysis, Unnamed Item, On the similarity metric and the distance metric, Comparison of strings belonging to the same family, Estimating the Gumbel scale parameter for local alignment of random sequences by importance sampling with stopping times, General methods of sequence comparison, A note on the evaluation of similarity (homology) of short sequences with long sequences, Line geometries for sequence comparisons, Algorithms for computing evolutionary similarity measures with length independent gap penalties, The prediction of a protein and nucleic acid structure: Problems and prospects
Cites Work
- Unnamed Item
- Matching code sequences utilizing context free quality measures
- A molecular sequence metric and evolutionary trees
- On the Theory and Computation of Evolutionary Distances
- Generalized Polykays, an Extension of Simple Polykays and Bipolykays
- Matching Sequences under Deletion/Insertion Constraints
