Modeling the covarion hypothesis of nucleotide substitution
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Publication:1381369
DOI10.1016/S0025-5564(97)00081-3zbMath0897.92025WikidataQ52252409 ScholiaQ52252409MaRDI QIDQ1381369
Publication date: 22 April 1998
Published in: Mathematical Biosciences (Search for Journal in Brave)
Related Items (13)
On the variational distance of two trees ⋮ Testing fundamental evolutionary hypotheses ⋮ Complex statistical modelling for phylogenetic inference ⋮ Closed form modeling of evolutionary rates by exponential Brownian functionals ⋮ Parsimony and the rank of a flattening matrix ⋮ Identifying evolutionary trees and substitution parameters for the general Markov model with invariable sites ⋮ Continuous and tractable models for the variation of evolutionary rates ⋮ On the dispersion index of a Markovian molecular clock ⋮ Lie Markov models ⋮ Bootstrapping phylogenetic trees: theory and methods ⋮ A stochastic model of gene evolution with chaotic mutations ⋮ Generalizing rate heterogeneity across sites in statistical phylogenetics ⋮ A stochastic model of gene evolution with time dependent pseudochaotic mutations
Cites Work
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- Necessary and sufficient conditions for the existence of certain quadratic invariants under a phylogenetic tree
- Markov chain models - rarity and exponentiality
- Approximating likelihoods under low but variable rates across sites
- Modeling nucleotide evolution: A heterogeneous rate analysis
- Inconsistency of evolutionary tree topology reconstruction methods when substitution rates vary across characters
- Estimation of evolutionary distances between homologous nucleotide sequences.
- Passage-time generating functions for continuous-time finite Markov chains
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