Simulating cellular dynamics through a coupled transcription, translation, metabolic model.

DOI10.1016/j.compbiolchem.2003.08.002zbMath1035.92012OpenAlexW2015365193WikidataQ47354735 ScholiaQ47354735MaRDI QIDQ1425242

Elizabeth L. Weitzke, Peter J. Ortoleva

Publication date: 15 March 2004

Published in: Computational Biology and Chemistry (Search for Journal in Brave)

Full work available at URL: https://doi.org/10.1016/j.compbiolchem.2003.08.002

zbMATH Keywords

Bio-polymerization kineticsCell modelingCellular dynamicsMulti-scale kineticsStoichiometric analysis

Mathematics Subject Classification ID

Biochemistry, molecular biology (92C40) Cell biology (92C37)

Related Items (3)

A framework for whole-cell mathematical modeling ⋮ Simulated complex dynamics of glycolysis in the protozoan parasite \textit{Trypanosoma brucei} ⋮ At a glance: Cellular biology for engineers

Uses Software

• SCAMP
• MCELL
• GEPASI
• E-CELL
• MEG
• Virtual Cell
• STOCHSIM

Cites Work

• Analysis of nonlinear dynamics on arbitrary geometries with the Virtual Cell
• The chemical basis of morphogenesis
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