Comparative analysis of protein primary sequences with graph energy

DOI10.1016/j.physa.2015.04.017zbMath1400.92618OpenAlexW779230311MaRDI QIDQ1618723

Wei Chen, Zengchao Mu, Yusen Zhang, Hai-Yan Wu

Publication date: 13 November 2018

Published in: Physica A (Search for Journal in Brave)

Full work available at URL: https://doi.org/10.1016/j.physa.2015.04.017

zbMATH Keywords

similarityLaplacian energygraph energy2-D graphical representationincrement of graphical energy

Mathematics Subject Classification ID

Applications of graph theory (05C90) Protein sequences, DNA sequences (92D20) Molecular structure (graph-theoretic methods, methods of differential topology, etc.) (92E10)

Related Items (6)

A novel model for protein sequence similarity analysis based on spectral radius ⋮ Unnamed Item ⋮ A Novel Fast Approach for Protein Classification and Evolutionary Analysis ⋮ Maximum degree and minimum degree spectral radii of some graph operations ⋮ Identifying anticancer peptides by using a generalized chaos game representation ⋮ Unnamed Item

Uses Software

• PSI-BLAST
• BLAST
• 2D-MH
• GPCRpred

Cites Work

• Laplacian energy of a graph
• 2D-MH: a web-server for generating graphic representation of protein sequences based on the physicochemical properties of their constituent amino acids
• A novel descriptor of protein sequences and its application
• Unnamed Item
• Unnamed Item
• Unnamed Item

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