Uncovering operational interactions in genetic networks using asynchronous Boolean dynamics

DOI10.1016/j.jtbi.2009.06.006zbMath1402.92207OpenAlexW2048152443WikidataQ51820565 ScholiaQ51820565MaRDI QIDQ1625862

Madalena Chaves, Laurent Tournier

Publication date: 26 November 2018

Published in: Journal of Theoretical Biology (Search for Journal in Brave)

Full work available at URL: https://doi.org/10.1016/j.jtbi.2009.06.006

zbMATH Keywords

model reductionapoptosisBoolean networksasynchronous transition graphNF\(\kappa\)B signalling pathway

Mathematics Subject Classification ID

Biochemistry, molecular biology (92C40) Cell biology (92C37) Software, source code, etc. for problems pertaining to biology (92-04) Systems biology, networks (92C42)

Related Items

Pinning control design for feedback stabilization of constrained Boolean control networks, Optimization-based approaches to control of probabilistic Boolean networks, Stabilization of probabilistic Boolean networks via pinning control strategy, Analysis and characterization of asynchronous state transition graphs using extremal states, Probabilistic approach for predicting periodic orbits in piecewise affine differential models, Global dynamics for switching systems and their extensions by linear differential equations, Comparison of Combinatorial Signatures of Global Network Dynamics Generated by Two Classes of ODE Models, State feedback stabilization for probabilistic Boolean networks, Numerical simulation of piecewise-linear models of gene regulatory networks using complementarity systems, Attractor analysis of asynchronous Boolean models of signal transduction networks, Exact control of genetic networks in a qualitative framework: the bistable switch example, Dynamical modeling and analysis of large cellular regulatory networks, Mapping multivalued onto Boolean dynamics, On convergence for hybrid models of gene regulatory networks under polytopic uncertainties: a Lyapunov approach, Design of fixed points in Boolean networks using feedback vertex sets and model reduction, Combinatorial Representation of Parameter Space for Switching Networks

Uses Software

• Ginsim
• REVEAL

Cites Work

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