Geometry preserving projections algorithm for predicting membrane protein types

DOI10.1016/j.jtbi.2009.09.027zbMath1403.92225OpenAlexW2038474719WikidataQ44289172 ScholiaQ44289172MaRDI QIDQ1628998

Xiao-ming Hu, Tong Wang, Tian Xia

Publication date: 11 December 2018

Published in: Journal of Theoretical Biology (Search for Journal in Brave)

Full work available at URL: https://doi.org/10.1016/j.jtbi.2009.09.027

zbMATH Keywords

bioinformaticsdimensionality reductionK-nearest neighbor (K-NN)

Mathematics Subject Classification ID

Applications of statistics to biology and medical sciences; meta analysis (62P10) Learning and adaptive systems in artificial intelligence (68T05) Protein sequences, DNA sequences (92D20)

Related Items

Efficacy of function specific 3D-motifs in enzyme classification according to their EC-numbers, Some remarks on protein attribute prediction and pseudo amino acid composition, Predicting membrane protein types by incorporating a novel feature set into Chou's general PseAAC

Uses Software

• Nuc-ploc
• Memtype-2L
• ESLpred
• GPCRpred

Cites Work

• Multimodal biometrics using geometry preserving projections