TMBETADISC-RBF: discrimination of \(\beta\)-barrel membrane proteins using RBF networks and PSSM profiles

DOI10.1016/j.compbiolchem.2008.03.002zbMath1403.92218DBLPjournals/candc/OuGCS08OpenAlexW1972475361WikidataQ30157690 ScholiaQ30157690MaRDI QIDQ1631055

M. Michael Gromiha, Makiko Suwa, Shu-An Chen, Yu-Yen Ou

Publication date: 5 December 2018

Published in: Computational Biology and Chemistry (Search for Journal in Brave)

Full work available at URL: https://doi.org/10.1016/j.compbiolchem.2008.03.002

zbMATH Keywords

radial basis functiondiscriminationPSSM profileouter membrane protein

Mathematics Subject Classification ID

Protein sequences, DNA sequences (92D20)

Uses Software

• BOMP
• TMB-Hunt
• PROFtmb
• PSI-BLAST
• BLAST
• LOCSVMPSI

Cites Work

• Application of residue distribution along the sequence for discriminating outer membrane proteins
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