Computation of direct and inverse mutations with the SEGM web server (stochastic evolution of genetic motifs): an application to splice sites of human genome introns

DOI10.1016/j.compbiolchem.2009.04.006zbMath1403.92129DBLPjournals/candc/BenardM09OpenAlexW2145015041WikidataQ51616603 ScholiaQ51616603MaRDI QIDQ1631063

Emmanuel Benard, Christian J. Michel

Publication date: 5 December 2018

Published in: Computational Biology and Chemistry (Search for Journal in Brave)

Full work available at URL: https://doi.org/10.1016/j.compbiolchem.2009.04.006

zbMATH Keywords

evolutionary computationstochastic evolutionweb serverdirect and inverse mutationsgenetic motifshuman genome intronssplice sites

Mathematics Subject Classification ID

Problems related to evolution (92D15) Genetics and epigenetics (92D10) Computational methods for problems pertaining to biology (92-08)

Related Items (6)

A stochastic evolution model for residue insertion-deletion independent from substitution ⋮ A new molecular evolution model for limited insertion independent of substitution ⋮ Identical sequence patterns in the ends of exons and introns of human protein-coding genes ⋮ An evolution model for sequence length based on residue insertion-deletion independent of substitution: an application to the \(GC\) content in bacterial genomes ⋮ A generalization of substitution evolution models of nucleotides to genetic motifs ⋮ SEGM

Cites Work

• Evolution probabilities and phylogenetic distance of dinucleotides
• Codon phylogenetic distance
• How to establish universal block-matrix factorizations
• Estimation of evolutionary distances between homologous nucleotide sequences.

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