The influence of the DNA torque on the dynamics of transcription bubbles in plasmid PTTQ18

DOI10.1016/j.jtbi.2018.04.036zbMath1400.92394OpenAlexW2801891680WikidataQ88515055 ScholiaQ88515055MaRDI QIDQ1642654

Ludmila V. Yakushevich, Andrey A. Grinevich

Publication date: 15 June 2018

Published in: Journal of Theoretical Biology (Search for Journal in Brave)

Full work available at URL: https://doi.org/10.1016/j.jtbi.2018.04.036

zbMATH Keywords

sine-Gordon equationDNAtranscription bubblebase oscillationsplasmid PTTQ18

Mathematics Subject Classification ID

PDEs in connection with biology, chemistry and other natural sciences (35Q92) Biochemistry, molecular biology (92C40) Protein sequences, DNA sequences (92D20)

Cites Work

• Unnamed Item
• Unnamed Item
• Unnamed Item
• Numerical analysis of solitons profiles in a composite model for DNA torsion dynamics
• Trajectories of DNA bubbles
• Does the dynamics of sine\,-\,Gordon solitons predict active regions of DNA?
• Longitudinal displacements of base pairs in DNA and effects on the dynamics of nonlinear excitations
• Propagation of Twist Solitons in Fully Inhomogeneous DNA Chains
• Solitons in Yakushevich-like models of DNA dynamics with improved intrapair potential
• Solitary waves in helicoidal models of DNA dynamics