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A combination dimensionality reduction approach to codon position patterns of eubacteria based on their complete genomes

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Publication:1670608
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DOI10.1016/j.jtbi.2010.12.014zbMath1405.92182OpenAlexW1992542778WikidataQ82916213 ScholiaQ82916213MaRDI QIDQ1670608

Ruo-Yan Wei, Zhao-Hui Qi

Publication date: 6 September 2018

Published in: Journal of Theoretical Biology (Search for Journal in Brave)

Full work available at URL: https://doi.org/10.1016/j.jtbi.2010.12.014


zbMATH Keywords

genomegraphical representationcodon usageeubacteria


Mathematics Subject Classification ID

Genetics and epigenetics (92D10)


Related Items (2)

Self-similarity analysis of eubacteria genome based on weighted graph ⋮ Analysis of codon use features of stearoyl-acyl carrier protein desaturase gene in \textit{Camellia sinensis}


Uses Software

  • GPCR-CA


Cites Work

  • New method for global alignment of 2 DNA sequences by the tree data structure
  • Predicting protein structural classes with pseudo amino acid composition: an approach using geometric moments of cellular automaton image
  • New 3D graphical representation of DNA sequence based on dual nucleotides
  • The community structure of human cellular signaling network


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