Mathematical basis of improved protein subfamily classification by a HMM-based sequence filter

DOI10.1016/J.MBS.2017.09.001zbMath1378.92049OpenAlexW2755142542WikidataQ47685519 ScholiaQ47685519MaRDI QIDQ1678523

Siddhartha Kundu

Publication date: 17 November 2017

Published in: Mathematical Biosciences (Search for Journal in Brave)

Full work available at URL: https://doi.org/10.1016/j.mbs.2017.09.001

zbMATH Keywords

hidden Markov modelphylogeneticsprotein subfamilystatistical filter

Mathematics Subject Classification ID

Problems related to evolution (92D15) Taxonomy, cladistics, statistics in mathematical biology (92B10) Biochemistry, molecular biology (92C40)

Uses Software

• Pfam
• GenThreader

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