A network hierarchy-based method for functional module detection in protein-protein interaction networks

DOI10.1016/j.jtbi.2018.06.026zbMath1406.92247OpenAlexW2809812150WikidataQ57467617 ScholiaQ57467617MaRDI QIDQ1714257

Ling Chen, Byeungwoo Jeon, Wei Liu, Liangyu Ma, Bo-Lun Chen

Publication date: 31 January 2019

Published in: Journal of Theoretical Biology (Search for Journal in Brave)

Full work available at URL: https://doi.org/10.1016/j.jtbi.2018.06.026

zbMATH Keywords

functional module detectionhierarchy treeprotein-protein network

Mathematics Subject Classification ID

Applications of graph theory (05C90) Biochemistry, molecular biology (92C40) Software, source code, etc. for problems pertaining to biology (92-04) Systems biology, networks (92C42)

Related Items (2)

Random growth networks with exponential degree distribution ⋮ An ensemble of random graphs with identical degree distribution

Uses Software

• apcluster
• APCluster
• CFinder
• MCODE

Cites Work

• Unnamed Item
• Clustering by Passing Messages Between Data Points
• Spectral clustering for detecting protein complexes in protein-protein interaction (PPI) networks
• EdgeMarker: identifying differentially correlated molecule pairs as edge-biomarkers
• BOULWARE STATE IN EXACTLY SOLVABLE MODELS OF 2D DILATON GRAVITY

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