New method for comparing DNA primary sequences based on a discrimination measure

DOI10.1016/j.jtbi.2010.07.040zbMath1407.92101OpenAlexW2029657424WikidataQ43985858 ScholiaQ43985858MaRDI QIDQ1726139

Jie Feng, Ping Wan, Aibing Zhang, Yong Hu, Wei-Zhong Zhao

Publication date: 19 February 2019

Published in: Journal of Theoretical Biology (Search for Journal in Brave)

Full work available at URL: http://europepmc.org/articles/pmc7094107

zbMATH Keywords

phylogenetic treesimilarity analysispairwise distance

Mathematics Subject Classification ID

Problems related to evolution (92D15) Protein sequences, DNA sequences (92D20)

Related Items (1)

C-curve: a novel 3D graphical representation of DNA sequence based on codons

Cites Work

• Spectral distortion measures for biological sequence comparisons and database searching
• TN curve: a novel 3D graphical representation of DNA sequence based on trinucleotides and its applications
• The Burrows-Wheeler similarity distribution between biological sequences based on Burrows-Wheeler transform
• Directed graphs of DNA sequences and their numerical characterization
• New 3D graphical representation of DNA sequence based on dual nucleotides
• An extension of the Burrows-Wheeler transform
• Statistical Measures of DNA Sequence Dissimilarity under Markov Chain Models of Base Composition
• Shared Information and Program Plagiarism Detection
• A measure of the similarity of sets of sequences not requiring sequence alignment.
• A Measure of DNA Sequence Dissimilarity Based on Mahalanobis Distance between Frequencies of Words

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