Formalizing and enriching phenotype signatures using Boolean networks

DOI10.1016/j.jtbi.2019.01.015zbMath1409.92097OpenAlexW2913317152WikidataQ91432948 ScholiaQ91432948MaRDI QIDQ1730115

Jacques Nicolas, Olivier Dameron, Elisabeth Remy, Anne Siegel, Méline Wery

Publication date: 11 March 2019

Published in: Journal of Theoretical Biology (Search for Journal in Brave)

Full work available at URL: https://hal.inria.fr/hal-02018724/file/JTB_WERY%282%29.pdf

zbMATH Keywords

steady stateformal concept analysisBoolean networksdynamic modelsphenotype signature

Mathematics Subject Classification ID

Systems biology, networks (92C42)

Related Items

Prologue to the special issue of JTB dedicated to the memory of René Thomas (1928--2017). A journey through biological circuits, logical puzzles and complex dynamics ⋮ Prioritization of candidate genes through Boolean networks

Uses Software

• Ginsim
• LatViz
• CoLoMoTo
• MSigDB

Cites Work

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