Maximum likelihood estimation of symmetric group-based models via numerical algebraic geometry

DOI10.1007/s11538-018-0523-2zbMath1410.92077OpenAlexW2898372902WikidataQ57790393 ScholiaQ57790393MaRDI QIDQ1736934

Dimitra Kosta, Kaie Kubjas

Publication date: 26 March 2019

Published in: Bulletin of Mathematical Biology (Search for Journal in Brave)

Full work available at URL: https://doi.org/10.1007/s11538-018-0523-2

zbMATH Keywords

maximum likelihood estimationnumerical algebraic geometryreal algebraic geometryphylogeneticsalgebraic statisticsgroup-based models

Mathematics Subject Classification ID

Problems related to evolution (92D15) Real algebraic and real-analytic geometry (14P99) Software, source code, etc. for problems pertaining to biology (92-04)

Related Items (3)

Maximum likelihood estimation of toric Fano varieties ⋮ Distance to the stochastic part of phylogenetic varieties ⋮ Embeddability and rate identifiability of Kimura 2-parameter matrices

Uses Software

• PHCpack
• fastDNAml
• Bertini
• NAG4M2
• NumericalAlgebraicGeometry

Cites Work

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