Enumeration of compact coalescent histories for matching gene trees and species trees
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Publication:1738019
DOI10.1007/s00285-018-1271-5zbMath1407.05129OpenAlexW2886279741WikidataQ90993825 ScholiaQ90993825MaRDI QIDQ1738019
Filippo Disanto, Noah A. Rosenberg
Publication date: 29 March 2019
Published in: Journal of Mathematical Biology (Search for Journal in Brave)
Full work available at URL: https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7661175
Problems related to evolution (92D15) Applications of graph theory (05C90) Exact enumeration problems, generating functions (05A15) Enumeration in graph theory (05C30) Asymptotic enumeration (05A16)
Related Items (6)
Enumeration of lonely pairs of gene trees and species trees by means of antipodal cherries ⋮ On the Colijn-Plazzotta numbering scheme for unlabeled binary rooted trees ⋮ The distributions under two species-tree models of the total number of ancestral configurations for matching gene trees and species trees ⋮ Counting and sampling gene family evolutionary histories in the duplication-loss and duplication-loss-transfer models ⋮ Computing the probability of gene trees concordant with the species tree in the multispecies coalescent ⋮ The distributions under two species-tree models of the number of root ancestral configurations for matching gene trees and species trees
Uses Software
Cites Work
- The probability distribution of ranked gene trees on a species tree
- There are no caterpillars in a wicked forest
- Generating functions for generating trees
- Coalescent histories for discordant gene trees and species trees
- On the number of non-equivalent ancestral configurations for matching gene trees and species trees
- ECO:a methodology for the enumeration of combinatorial objects
- The probabilities of rooted tree-shapes generated by random bifurcation
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