The third moments of the site frequency spectrum

DOI10.1016/j.tpb.2017.12.002zbMath1397.92456OpenAlexW2951492354WikidataQ50138233 ScholiaQ50138233MaRDI QIDQ1746157

Luca Ferretti, Alexander Klassmann

Publication date: 24 April 2018

Published in: Theoretical Population Biology (Search for Journal in Brave)

Full work available at URL: https://doi.org/10.1016/j.tpb.2017.12.002

zbMATH Keywords

skewnesssingle nucleotide polymorphismssite frequency spectrumnested mutationsinfinite-sites modelcoalescent approximation

Mathematics Subject Classification ID

Applications of statistics to biology and medical sciences; meta analysis (62P10) Problems related to evolution (92D15) Genetics and epigenetics (92D10)

Related Items

The neutral frequency spectrum of linked sites ⋮ Phase-type distributions in population genetics ⋮ Multivariate phase-type theory for the site frequency spectrum

Uses Software

• Mathematica

Cites Work

• On the total external length of the Kingman coalescent
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• Demography-adjusted tests of neutrality based on genome-wide SNP data
• Line-of-descent and genealogical processes, and their applications in population genetics models
• The coalescent
• On the number of segregating sites in genetical models without recombination
• Properties of a neutral allele model with intragenic recombination
• Statistical properties of segregating sites
• An analytical framework in the general coalescent tree setting for analyzing polymorphisms created by two mutations
• The internal branch lengths of the Kingman coalescent
• The neutral frequency spectrum of linked sites
• Approximate Sampling Formulae for General Finite-Alleles Models of Mutation
• Probability Models for DNA Sequence Evolution
• Polya Urn Models
• Diffusion models in population genetics
• Branching processes in biology
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