An evolution model for sequence length based on residue insertion-deletion independent of substitution: an application to the \(GC\) content in bacterial genomes

DOI10.1007/s11538-012-9735-zzbMath1312.92033OpenAlexW2154277181WikidataQ51362475 ScholiaQ51362475MaRDI QIDQ1758098

Sophie Lèbre, Christian J. Michel

Publication date: 7 November 2012

Published in: Bulletin of Mathematical Biology (Search for Journal in Brave)

Full work available at URL: https://doi.org/10.1007/s11538-012-9735-z

zbMATH Keywords

stochastic modelsubstitutiondeletioninsertionsequence lengthcomparative genomicsnucleotidesevolution modelbacterial genomes\(GC\) content

Mathematics Subject Classification ID

Biochemistry, molecular biology (92C40) Genetics and epigenetics (92D10)

Related Items (1)

A new molecular evolution model for limited insertion independent of substitution

Uses Software

• fastDNAml
• SEGM

Cites Work

• Analytical expression of the purine-pyrimidine codon probability after and before random mutations
• Computation of direct and inverse mutations with the SEGM web server (stochastic evolution of genetic motifs): an application to splice sites of human genome introns
• A stochastic evolution model for residue insertion-deletion independent from substitution
• An analytical model of gene evolution with 9 mutation parameters: An application to the amino acids coded by the common circular code
• Estimation of evolutionary distances between homologous nucleotide sequences.
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