On stoichiometry for the assembly of flexible tile DNA complexes

DOI10.1007/s11047-009-9169-1zbMath1251.92009OpenAlexW2094966981MaRDI QIDQ1761688

Gregory Loren McColm, A. Staninska, Nataša Jonoska

Publication date: 15 November 2012

Published in: Natural Computing (Search for Journal in Brave)

Full work available at URL: https://doi.org/10.1007/s11047-009-9169-1

zbMATH Keywords

complex assemblyflexible DNA tile assemblygraphical representation of structuressolution spaces of DNA computation problemsstoichiometry of test tube

Mathematics Subject Classification ID

Biochemistry, molecular biology (92C40) Computational methods for problems pertaining to biology (92-08)

Related Items (6)

Design formalism for DNA self-assembly of polyhedral skeletons using rigid tiles ⋮ A comparison of graph-theoretic DNA hybridization models ⋮ On the minimum number of bond-edge types and tile types: an approach by edge-colorings of graphs ⋮ Graph-Theoretic Formalization of Hybridization in DNA Sticker Complexes ⋮ Computing properties of stable configurations of thermodynamic binding networks ⋮ Graph-theoretic formalization of hybridization in DNA sticker complexes

Cites Work

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• Complexity classes for self-assembling flexible tiles
• Linear programming: mathematics, theory and algorithms
• The program-size complexity of self-assembled squares (extended abstract)
• Combinatorial optimization problems in self-assembly
• Expectation and Variance of Self-assembled Graph Structures
• A Self-assembly Model of Time-Dependent Glue Strength
• Unconventional Computation

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