A novel clustering method via nucleotide-based Fourier power spectrum analysis

DOI10.1016/j.jtbi.2011.03.029zbMath1397.92552OpenAlexW2021267107WikidataQ44105858 ScholiaQ44105858MaRDI QIDQ1783486

Bo Zhao, Victor Duan, Stephen Shing-Toung Yau

Publication date: 21 September 2018

Published in: Journal of Theoretical Biology (Search for Journal in Brave)

Full work available at URL: http://europepmc.org/articles/pmc7094093

zbMATH Keywords

clusteringDNA sequencesphylogenetic treesFourier spectral methodmoment vectors

Mathematics Subject Classification ID

Applications of statistics to biology and medical sciences; meta analysis (62P10) Problems related to evolution (92D15) Biochemistry, molecular biology (92C40) Protein sequences, DNA sequences (92D20)

Related Items (1)

A new method to cluster DNA sequences using Fourier power spectrum

Uses Software

• R
• MUSCLE
• Clustal X
• MISHIMA

Cites Work

• Prediction of protein coding regions by the 3-base periodicity analysis of a DNA sequence

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