Self-similarity analysis of eubacteria genome based on weighted graph

DOI10.1016/j.jtbi.2011.03.033zbMath1397.92227OpenAlexW1995001608WikidataQ83876389 ScholiaQ83876389MaRDI QIDQ1783501

Xiao-Qin Qi, Ling Li, Zhi-Meng Zhang, Zhao-Hui Qi

Publication date: 21 September 2018

Published in: Journal of Theoretical Biology (Search for Journal in Brave)

Full work available at URL: http://europepmc.org/articles/pmc7094106

zbMATH Keywords

social structurebiological sequenceevolution patterngraphic approach

Mathematics Subject Classification ID

Applications of graph theory (05C90) Biochemistry, molecular biology (92C40)

Related Items (1)

Applications of Markov spectra for the weighted partition network by the substitution rule

Uses Software

• PSI-BLAST
• BLAST
• 2D-MH
• GPCR-2L
• GPCR-GIA
• Quat-2L
• GPCR-CA
• FoldRate

Cites Work

• A combination dimensionality reduction approach to codon position patterns of eubacteria based on their complete genomes
• Some remarks on protein attribute prediction and pseudo amino acid composition
• 2D-MH: a web-server for generating graphic representation of protein sequences based on the physicochemical properties of their constituent amino acids
• Predicting protein structural classes with pseudo amino acid composition: an approach using geometric moments of cellular automaton image
• An application of gene comparative image for predicting the effect on replication ratio by HBV virus gene missense mutation
• New 3D graphical representation of DNA sequence based on dual nucleotides
• The community structure of human cellular signaling network
• Emergence of Scaling in Random Networks
• Collective dynamics of ‘small-world’ networks

This page was built for publication: Self-similarity analysis of eubacteria genome based on weighted graph