Estimating phylogenetic trees from pairwise likelihoods and posterior probabilities of substitution counts

DOI10.1016/j.jtbi.2011.04.005zbMath1397.92496OpenAlexW2002840130WikidataQ51600125 ScholiaQ51600125MaRDI QIDQ1783523

Mark T. Holder, Mike A. Steel

Publication date: 21 September 2018

Published in: Journal of Theoretical Biology (Search for Journal in Brave)

Full work available at URL: https://doi.org/10.1016/j.jtbi.2011.04.005

zbMATH Keywords

consistencymaximum likelihoodcounting processesphylogenetic inferencedistance-based phylogenetic inference

Mathematics Subject Classification ID

Problems related to evolution (92D15) Genetics and epigenetics (92D10)

Uses Software

• PAUP*

Cites Work

• Counting labeled transitions in continuous-time Markov models of evolution
• The performance of neighbor-joining methods of phylogenetic reconstruction
• Full reconstruction of Markov models on evolutionary trees: identifiability and consistency.
• Retractions of finite distance functions onto tree metrics
• A molecular sequence metric and evolutionary trees
• Toward Extracting All Phylogenetic Information from Matrices of Evolutionary Distances
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