Stochastic Petri net extension of a yeast cell cycle model

DOI10.1016/j.jtbi.2008.07.019zbMath1400.92341OpenAlexW2098057270WikidataQ51871240 ScholiaQ51871240MaRDI QIDQ1797724

Ivan Mura, Attila Csikász-Nagy

Publication date: 22 October 2018

Published in: Journal of Theoretical Biology (Search for Journal in Brave)

Full work available at URL: https://doi.org/10.1016/j.jtbi.2008.07.019

zbMATH Keywords

simulationmathematical modelingsystems biologymodel comparisoncell cycleSPN

Mathematics Subject Classification ID

Applications of stochastic analysis (to PDEs, etc.) (60H30) Models and methods for concurrent and distributed computing (process algebras, bisimulation, transition nets, etc.) (68Q85) Physiological, cellular and medical topics (92C99) Systems biology, networks (92C42)

Related Items (5)

Logical analysis of the budding yeast cell cycle ⋮ Modeling innate immune response to early Mycobacterium infection ⋮ Derivation and experimental comparison of cell-division probability densities ⋮ Efficient modelling of yeast cell cycles based on multisite phosphorylation using coloured hybrid Petri nets with marking-dependent arc weights ⋮ Petri net representation of multi-valued logical regulatory graphs

Uses Software

• SPNP

Cites Work

• Unnamed Item
• A stochastic model of cell division (with application to fission yeast)
• Antagonism and bistability in protein interaction networks
• Effects of stochasticity in models of the cell cycle: from quantized cycle times to noise-induced oscillations
• Mitotic exit in two dimensions
• Stochastic model of yeast cell-cycle network

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