The number of standard and of effective multiple alignments

DOI10.1016/S0893-9659(98)00054-8zbMath0936.92022WikidataQ60692079 ScholiaQ60692079MaRDI QIDQ1808638

Yanyan Li

Publication date: 25 November 1999

Published in: Applied Mathematics Letters (Search for Journal in Brave)

zbMATH Keywords

sequence analysisMöbius inversioncomputational biologymultiple alignmentsequence alignmentenumerative combinatoricsexclusion/inclusion principle

Mathematics Subject Classification ID

Biochemistry, molecular biology (92C40) Protein sequences, DNA sequences (92D20) Enumerative combinatorics (05A99)

Related Items (3)

Hoffman-type identities ⋮ Counting, Generating, Analyzing and Sampling Tree Alignments ⋮ Counting, Generating and Sampling Tree Alignments

Uses Software

• OEIS

Cites Work

• Multidimensional scaling by optimizing goodness of fit to a nonmetric hypothesis
• Asymptotic Limits for a Two-Dimensional Recursion
• Multiple DNA and protein sequence alignment based on segment-to-segment comparison.
• [https://portal.mardi4nfdi.de/wiki/Publication:5731810 On the foundations of combinatorial theory I. Theory of M�bius Functions]
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