Approximate protein folding in the HP side chain model on extended cubic lattices

DOI10.1016/S0166-218X(02)00382-7zbMath1014.92013MaRDI QIDQ1868719

Volker Heun

Publication date: 28 April 2003

Published in: Discrete Applied Mathematics (Search for Journal in Brave)

zbMATH Keywords

computational biologyprotein structure predictionHP model

Mathematics Subject Classification ID

Biochemistry, molecular biology (92C40) Complexity and performance of numerical algorithms (65Y20) Computational methods for problems pertaining to biology (92-08)

Related Items (3)

Protein folding in the HP model on grid lattices with diagonals ⋮ Clique-detection models in computational biochemistry and genomics ⋮ Stochastic protein folding simulation in the three-dimensional HP-model

Cites Work

• On the intractability of protein folding with a finite alphabet of amino acids
• Finding the lowest free energy conformation of a protein is an NP-hard problem: Proof and implications
• Complexity of protein folding
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